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Date: |
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Time: |
Thursday, 29. Oct. 2015 |
Audio-only-Recording as MP3-File
(smallest possible size):
- Audio.mp3 (ca.27 Mb) ============================================ Video-Recording for any system with MP4-support:
- Video.mp4 (ca.233 Mb) |
15:20 – 16:20 |
Speaker :
Mogens Jensen (Niels Bohr
Institute,
Abstract :
Oscillating genetic patterns have been observed in networks related to the
transcription factors NFkB,
p53 and
Hes1 [1]. We have identified the central feed-back loops leading to
oscillations. By applying an external
periodic
signal, it is possible to lock the internal oscillation to the external signal.
For the NF-kB systems in single cells
we have
observed that the two signals lock when the ration between the two frequencies
is close to basic rational numbers [2].
The
resulting response of the cell can be mapped out as
a chaotic
dynamics of the concentration in NF-kB [2,3]. The
group of Savas Tay (ETH,
of the
NF-kB system observed transitions from one tongue to
the other when they overlap.
We
investigate this effect by Gillespie simulations and find interesting time
correlation for the transitions probabilities when
switching
from one tongue to the other.
[1] B. Mengel, A. Hunziker, L. Pedersen,
A. Trusina, M.H. Jensen and S. Krishna, "Modeling oscillatory control in NF-kB,
p53
and Wnt signaling", Current
Opinion in Genetics and Development 20, 656-664 (2010).
[2] M.H.
Jensen and
FEBS Letters 586, 1664-1668 (2012).
[3] N. Mitarai, U. Alon and M.H. Jensen,
"Entrainment of linear and non-linear systems under noise",
Chaos, Chaos 23, 023125
(2013).